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| 文件名: 因果推断:假设分析.pdf | |
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Causal Inference: What If
by Miguel A. Hern´an, James M. Robins December 31, 2020 (revised January 2023) Contents Introduction: Towards less casual causal inferences vii I Causal inference without models 1 1 A definition of causal effect 3 1.1 Individual causal effects . . . . . . . . . . . . . . . . . . . . . . . 3 1.2 Average causal effects . . . . . . . . . . . . . . . . . . . . . . . . 4 1.3 Measures of causal effect . . . . . . . . . . . . . . . . . . . . . . . 7 1.4 Random variability . . . . . . . . . . . . . . . . . . . . . . . . . . 8 1.5 Causation versus association . . . . . . . . . . . . . . . . . . . . 10 2 Randomized experiments 13 2.1 Randomization . . . . . . . . . . . . . . . . . . . . . . . . . . . . 13 2.2 Conditional randomization . . . . . . . . . . . . . . . . . . . . . 17 2.3 Standardization . . . . . . . . . . . . . . . . . . . . . . . . . . . . 19 2.4 Inverse probability weighting . . . . . . . . . . . . . . . . . . . . 20 3 Observational studies 27 3.1 Identifiability conditions . . . . . . . . . . . . . . . . . . . . . . . 27 3.2 Exchangeability . . . . . . . . . . . . . . . . . . . . . . . . . . . . 29 3.3 Positivity . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 32 3.4 Consistency: First, define the counterfactual outcome . . . . . . 33 3.5 Consistency: Second, link counterfactuals to the observed data . 37 3.6 The target trial . . . . . . . . . . . . . . . . . . . . . . . . . . . . 39 4 Effect modification 43 4.1 Heterogeneity of treatment effects . . . . . . . . . . . . . . . . . 43 4.2 Stratification to identify effect modification . . . . . . . . . . . . 45 4.3 Why care about effect modification . . . . . . . . . . . . . . . . . 47 4.4 Stratification as a form of adjustment . . . . . . . . . . . . . . . 49 4.5 Matching as another form of adjustment . . . . . . . . . . . . . . 51 4.6 Effect modification and adjustment methods . . . . . . . . . . . 52 5 Interaction 57 5.1 Interaction requires a joint intervention . . . . . . . . . . . . . . 57 5.2 Identifying interaction . . . . . . . . . . . . . . . . . . . . . . . . 58 5.3 Counterfactual response types and interaction . . . . . . . . . . . 60 5.4 Sufficient causes . . . . . . . . . . . . . . . . . . . . . . . . . . . 62 5.5 Sufficient cause interaction . . . . . . . . . . . . . . . . . . . . . 65 5.6 Counterfactuals or sufficient-component causes? . . . . . . . . . . 67 6 Graphical representation of causal effects 71 6.1 Causal diagrams . . . . . . . . . . . . . . . . . . . . . . . . . . . 71 6.2 Causal diagrams and marginal independence . . . . . . . . . . . 73 6.3 Causal diagrams and conditional independence . . . . . . . . . . 76 6.4 Positivity and consistency in causal diagrams . . . . . . . . . . . 77 6.5 A structural classification of bias . . . . . . . . . . . . . . . . . . 80 6.6 The structure of effect modification . . . . . . . . . . . . . . . . . 83 7 Confounding 85 7.1 The structure of confounding . . . . . . . . . . . . . . . . . . . . 85 7.2 Confounding and exchangeability . . . . . . . . . . . . . . . . . . 87 7.3 Confounding and the backdoor criterion . . . . . . . . . . . . . . 89 7.4 Confounding and confounders . . . . . . . . . . . . . . . . . . . . 92 7.5 Single-world intervention graphs . . . . . . . . . . . . . . . . . . 95 7.6 Confounding adjustment . . . . . . . . . . . . . . . . . . . . . . . 96 8 Selection bias 101 8.1 The structure of selection bias . . . . . . . . . . . . . . . . . . . 101 8.2 Examples of selection bias . . . . . . . . . . . . . . . . . . . . . . 103 8.3 Selection bias and confounding . . . . . . . . . . . . . . . . . . . 105 8.4 Selection bias and censoring . . . . . . . . . . . . . . . . . . . . . 107 8.5 How to adjust for selection bias . . . . . . . . . . . . . . . . . . . 109 8.6 Selection without bias . . . . . . . . . . . . . . . . . . . . . . . . 113 9 Measurement bias 117 9.1 Measurement error . . . . . . . . . . . . . . . . . . . . . . . . . . 117 9.2 The structure of measurement error . . . . . . . . . . . . . . . . 118 9.3 Mismeasured confounders and colliders . . . . . . . . . . . . . . . 120 9.4 Causal diagrams without measured variables? . . . . . . . . . . . 122 9.5 Many proposed causal diagrams are actually noncausal . . . . . 123 9.6 Does it matter that many proposed diagrams are noncausal? . . 125 10 Random variability 129 10.1 Identification versus estimation . . . . . . . . . . . . . . . . . . 129 10.2 Estimation of causal effects . . . . . . . . . . . . . . . . . . . . 132 10.3 The myth of the super-population . . . . . . . . . . . . . . . . . 134 10.4 The conditionality “principle” . . . . . . . . . . . . . . . . . . . 136 10.5 The curse of dimensionality . . . . . . . . . . . . . . . . . . . . 140 II Causal inference with models 143 11 Why model? 145 11.1 Data cannot speak for themselves . . . . . . . . . . . . . . . . . 145 11.2 Parametric estimators of the conditional mean . . . . . . . . . . 147 11.3 Nonparametric estimators of the conditional mean . . . . . . . 148 11.4 Smoothing . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 149 11.5 The bias-variance trade-off . . . . . . . . . . . . . . . . . . . . . 15 12 IP weighting and marginal structural models 155 12.1 The causal question . . . . . . . . . . . . . . . . . . . . . . . . . 155 12.2 Estimating IP weights via modeling . . . . . . . . . . . . . . . . 156 12.3 Stabilized IP weights . . . . . . . . . . . . . . . . . . . . . . . . 159 12.4 Marginal structural models . . . . . . . . . . . . . . . . . . . . . 161 12.5 Effect modification and marginal structural models . . . . . . . 163 12.6 Censoring and missing data . . . . . . . . . . . . . . . . . . . . 164 13 Standardization and the parametric g-formula 167 13.1 Standardization as an alternative to IP weighting . . . . . . . . 167 13.2 Estimating the mean outcome via modeling . . . . . . . . . . . 169 13.3 Standardizing the mean outcome to the confounder distribution 170 13.4 IP weighting or standardization? . . . . . . . . . . . . . . . . . 171 13.5 How seriously do we take our estimates? . . . . . . . . . . . . . 173 14 G-estimation of structural nested models 179 14.1 The causal question revisited . . . . . . . . . . . . . . . . . . . 179 14.2 Exchangeability revisited . . . . . . . . . . . . . . . . . . . . . . 180 14.3 Structural nested mean models . . . . . . . . . . . . . . . . . . 181 14.4 Rank preservation . . . . . . . . . . . . . . . . . . . . . . . . . . 183 14.5 G-estimation . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 185 14.6 Structural nested models with two or more parameters . . . . . 188 15 Outcome regression and propensity scores 191 15.1 Outcome regression . . . . . . . . . . . . . . . . . . . . . . . . . 191 15.2 Propensity scores . . . . . . . . . . . . . . . . . . . . . . . . . . 193 15.3 Propensity stratification and standardization . . . . . . . . . . . 194 15.4 Propensity matching . . . . . . . . . . . . . . . . . . . . . . . . 196 15.5 Propensity models, structural models, predictive models . . . . 197 16 Instrumental variable estimation 201 16.1 The three instrumental conditions . . . . . . . . . . . . . . . . . 201 16.2 The usual IV estimand . . . . . . . . . . . . . . . . . . . . . . . 204 16.3 A fourth identifying condition: homogeneity . . . . . . . . . . . 206 16.4 An alternative fourth condition: monotonicity . . . . . . . . . . 209 16.5 The three instrumental conditions revisited . . . . . . . . . . . 212 16.6 Instrumental variable estimation versus other methods . . . . . 215 17 Causal survival analysis 219 17.1 Hazards and risks . . . . . . . . . . . . . . . . . . . . . . . . . . 219 17.2 From hazards to risks . . . . . . . . . . . . . . . . . . . . . . . . 221 17.3 Why censoring matters . . . . . . . . . . . . . . . . . . . . . . . 224 17.4 IP weighting of marginal structural models . . . . . . . . . . . . 226 17.5 The parametric g-formula . . . . . . . . . . . . . . . . . . . . . 228 17.6 G-estimation of structural nested models . . . . . . . . . . . . . 229 18 Variable selection for causal inference 233 18.1 The different goals of variable selection . . . . . . . . . . . . . . 233 18.2 Variables that induce or amplify bias . . . . . . . . . . . . . . . 234 18.3 Causal inference and machine learning . . . . . . . . . . . . . . 238 18.4 Doubly robust machine learning estimators . . . . . . . . . . . . 239 18.5 Variable selection is a difficult problem . . . . . . . . . . . . . . 242 III Causal inference from complex longitudinal data 245 19 Time-varying treatments 247 19.1 The causal effect of time-varying treatments . . . . . . . . . . . 247 19.2 Treatment strategies . . . . . . . . . . . . . . . . . . . . . . . . 248 19.3 Sequentially randomized experiments . . . . . . . . . . . . . . . 249 19.4 Sequential exchangeability . . . . . . . . . . . . . . . . . . . . . 251 19.5 Identifiability under some but not all treatment strategies . . . 253 19.6 Time-varying confounding and time-varying confounders . . . . 257 20 Treatment-confounder feedback 259 20.1 The elements of treatment-confounder feedback . . . . . . . . . 259 20.2 The bias of traditional methods . . . . . . . . . . . . . . . . . . 261 20.3 Why traditional methods fail . . . . . . . . . . . . . . . . . . . 263 20.4 Why traditional methods cannot be fixed . . . . . . . . . . . . . 265 20.5 Adjusting for past treatment . . . . . . . . . . . . . . . . . . . . 266 21 G-methods for time-varying treatments 269 21.1 The g-formula for time-varying treatments . . . . . . . . . . . . 269 21.2 IP weighting for time-varying treatments . . . . . . . . . . . . . 274 21.3 A doubly robust estimator for time-varying treatments . . . . . 278 21.4 G-estimation for time-varying treatments . . . . . . . . . . . . . 281 21.5 Censoring is a time-varying treatment . . . . . . . . . . . . . . 289 21.6 The big g-formula . . . . . . . . . . . . . . . . . . . . . . . . . . 292 22 Target trial emulation 297 22.1 Intention-to-treat effect and per-protocol effect . . . . . . . . . 297 22.2 A target trial with sustained treatment strategies . . . . . . . . 301 22.3 Emulating a target trial with sustained strategies . . . . . . . . 305 22.4 Time zero . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 307 22.5 A unified approach to causal inference . . . . . . . . . . . . . . 309 23 Causal mediation 313 23.1 Mediation analysis under attack . . . . . . . . . . . . . . . . . . 313 23.2 A defense of mediation analysis . . . . . . . . . . . . . . . . . . 315 23.3 Empirically verifiable mediation . . . . . . . . . . . . . . . . . . 317 23.4 An interventionist theory of mediation . . . . . . . . . . . . . . 319 References 321 Index 341 |
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