Stan: 最新Bayesian分析软件

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关键词：Bayesian分析 Bayesian Bayes 分析软件 baye 软件

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Stan 2.0

---

Stan is a package for obtaining Bayesian inference using the No-U-Turn sampler, a variant of Hamiltonian Monte Carlo.

Stan is freedom-respecting, open-source software.

Download & Get Started

Each platform release is self-contained and portable across operating systems.

• RStan Getting Started v2.0.1   (GNU Public License v3)
• Command-Line Stan v2.0.1   (New BSD License)
• PyStan v2.0.1.0   (GNU Public License v3)
  

Language Manual

• Stan User's Guide and Reference Manual v2.0.1   (CC BY v3 License)
  

Example Models

• BUGS and ARM Examples   (new BSD License)
  

Contact

• Mailing Lists
• Bug Reports & Feature Requests
  

More Information

• Source Repository
• Contribute Code & Models
• Stan Citations
• Development Team
  

---

This is the home page for the book, Bayesian Data Analysis, by Andrew Gelman, John Carlin, Hal Stern, David Dunson, Aki Vehtari, and Donald Rubin.

Teaching Bayesian data analysis

• Slides for 24 lectures of 75 minutes each
• 75 best lines from my course
• A student's lecture notes
• An article on teaching Bayesian applied statistics to students in social science and public health
• An article with some class-participation demonstrations for decision theory and Bayesian statistics
• For discussion topics, the Bayesian category of our research blog
  

Computing

• Stan (for posterior simulations)
• GPStuff (for fitting Gaussian processes; we used it to fit the birthday data shown on the book cover)
• Appendix C from the third edition of Bayesian Data Analysis. This appendix has an extended example of the use of Stan and R.
  

Other

• Datasets for most of the examples from the book
• Solutions to some of the exercises in the third, second, and first editions
• Reviews from prepublication, first edition, and second edition
• Table of contents and index.
• Errata for second edition of the book and for the first, second, third, fourth, fifth, and sixth printings of the first edition
  

Back to Andrew Gelman's homepage.

刚买了第三版，看着很不错，可惜还没多少时间去仔细读

Lisrelchen 发表于 2013-12-6 02:26
This is the home page for the book, Bayesian Data Analysis, by Andrew Gelman, John Carlin, Hal Stern ...

不能安装rstan包，求指导我安装之后的结果
options(repos = c(getOption("repos"),
+         rstan = "http://wiki.rstan-repo.googlecode.com/git/"))
> install.packages('rstan', type = 'source')
Warning: unable to access index for repository http://wiki.rstan-repo.googlecod ... .tar.gz/src/contrib
Warning: unable to access index for repository http://wiki.rstan-repo.googlecod ... .tar.gz/src/contrib
Warning: unable to access index for repository http://wiki.rstan-repo.googlecod ... .tar.gz/src/contrib
also installing the dependency 'inline'

trying URL 'http://cran.ms.unimelb.edu.au/src/contrib/inline_0.3.13.tar.gz'
Content type 'application/x-tar' length 14224 bytes (13 Kb)
opened URL
downloaded 13 Kb

trying URL 'http://wiki.rstan-repo.googlecode.com/git/src/contrib/rstan_2.0.1.tar.gz'
Content type 'application/x-gzip' length 4773521 bytes (4.6 Mb)
opened URL
downloaded 4.6 Mb

* installing *source* package 'inline' ...
** package 'inline' successfully unpacked and MD5 sums checked
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded
* DONE (inline)


  C-c C-c
Warning message:

In install.packages("rstan", type = "source") :
  installation of package 'rstan' had non-zero exit status
> > > require("rstan")
Loading required package: rstan
Warning message:
In library(package, lib.loc = lib.loc, character.only = TRUE, logical.return = TRUE,  :
  there is no package called 'rstan'
> sessionInfo()
R version 3.0.2 (2013-09-25)
Platform: x86_64-w64-mingw32/x64 (64-bit)

locale:
[1] LC_COLLATE=Chinese (Simplified)_People's Republic of China.936
[2] LC_CTYPE=Chinese (Simplified)_People's Republic of China.936   
[3] LC_MONETARY=Chinese (Simplified)_People's Republic of China.936
[4] LC_NUMERIC=C                                                   
[5] LC_TIME=Chinese (Simplified)_People's Republic of China.936   

attached base packages:
[1] stats     graphics  grDevices utils     datasets  methods   base     

loaded via a namespace (and not attached):
[1] compiler_3.0.2 tools_3.0.2